E-MTAB-3397

What We Learned
  • In this study microRNA (miRNA) profiles were studied as potential biomarkers to predict the prostate cancer outcome.
  • A set of nine miRNAs was able to separate cases from controls. 
  • The detected miRNA expression profiles could predict the development of the disease years before the actual PrCa diagnosis or detect the existence of other cancers in the studied individuals. 
  • Furthermore, using an expression Quantitative Trait Loci (eQTL) analysis, regulatory SNPs for miRNA miR-483-3p that were also directly associated with PrCa were found.
What We Did
  • A classification model (normal against prostate cancer) has been built using raw Trainset. The selected probes were:
    1. hsa-mir-939
    2. hsa-mir-877
    3. hsa-mir-601
  • The model has been tested using raw Testset.
 
  • A classification model (normal against prostate cancer) has been built using processed Trainset. The selected probes were:
    1. hsa-mir-107
    2. hsa-mir-770-5p
    3. hsa-mir-630
    4. hsa-mir-744*
  • The model has been tested using processed Testset.